If it's a character thinking to himself, it would be in ital, as if the character had actually spoken--only without quotes:
I wish I could kick that midget in the crotch, but that'd be mean, Josh thought.
Alternatively, you could do the following without ital, to avoid breaking the flow of your narrative:
Josh wished he could kick that midget in the crotch, but figured it would be mean.
...Now, let's discuss where you came up with that sentence! lol
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